TY - GEN
T1 - Utilizing average symmetrical surface distance in active shape modeling for subcortical surface generation with slow-fast learning
AU - Zhong, Pinyuan
AU - Cheng, Ran
AU - Tang, Xiaoying
N1 - Publisher Copyright:
© 2022 IEEE.
PY - 2022
Y1 - 2022
N2 - In this paper, we propose and validate an automatic pipeline for subcortical surface generation by making use of the average symmetrical surface distance (ASSD) loss in active shape modeling (ASM). A group of template surfaces are first generated via large deformation diffeomorphic metric mapping based surface deformation. ASM is then employed to obtain the mean shape and shape variation parameters of the template surfaces. To obtain the optimal shape variation parameters which best fit the target structure after acting upon the mean shape, a recently proposed derivative-free optimization method (the slow-fast learning method) is adopted. The ASSD loss, in addition to the typically utilized Dice similarity coefficient loss, is employed during the learning process to help enhance the boundary accuracy. We successfully validate the importance of the ASSD loss through ablation analysis. In addition, we show the effectiveness of the slow-fast learning method by comparing it with other state-of-the-art derivative-free optimization algorithms. Our proposed pipeline is found to be capable of yielding subcortical surfaces with high accuracy, correct anatomical topology, and sufficient smoothness. Clinical Relevance- This work provides a useful tool for generating subcortical surfaces which are important biomarkers for a variety of brain disorders.
AB - In this paper, we propose and validate an automatic pipeline for subcortical surface generation by making use of the average symmetrical surface distance (ASSD) loss in active shape modeling (ASM). A group of template surfaces are first generated via large deformation diffeomorphic metric mapping based surface deformation. ASM is then employed to obtain the mean shape and shape variation parameters of the template surfaces. To obtain the optimal shape variation parameters which best fit the target structure after acting upon the mean shape, a recently proposed derivative-free optimization method (the slow-fast learning method) is adopted. The ASSD loss, in addition to the typically utilized Dice similarity coefficient loss, is employed during the learning process to help enhance the boundary accuracy. We successfully validate the importance of the ASSD loss through ablation analysis. In addition, we show the effectiveness of the slow-fast learning method by comparing it with other state-of-the-art derivative-free optimization algorithms. Our proposed pipeline is found to be capable of yielding subcortical surfaces with high accuracy, correct anatomical topology, and sufficient smoothness. Clinical Relevance- This work provides a useful tool for generating subcortical surfaces which are important biomarkers for a variety of brain disorders.
UR - https://www.scopus.com/pages/publications/85138127226
U2 - 10.1109/EMBC48229.2022.9871829
DO - 10.1109/EMBC48229.2022.9871829
M3 - Conference article published in proceeding or book
C2 - 36086301
AN - SCOPUS:85138127226
T3 - Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS
SP - 230
EP - 233
BT - 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2022
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 44th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2022
Y2 - 12 July 2022 through 15 July 2022
ER -