TY - JOUR
T1 - Self-co-attention neural network for anatomy segmentation in whole breast ultrasound
AU - Lei, Baiying
AU - Huang, Shan
AU - Li, Hang
AU - Li, Ran
AU - Bian, Cheng
AU - Chou, Yi Hong
AU - Qin, Jing
AU - Zhou, Peng
AU - Gong, Xuehao
AU - Cheng, Jie Zhi
N1 - Funding Information:
This work was supported partly by National Natural Science Foundation of China (Nos. 61871274 , 61801305 and 81571758 ), Key Laboratory of Medical Image Processing of Guangdong Province (No. K217300003 ), Guangdong Pearl River Talents Plan ( 2016ZT06S220 ), Shenzhen Peacock Plan (Nos. KQTD2016053112051497 and KQTD2015033016104926 ), Shenzhen Key Basic Research Project (Nos. GJHZ20190822095414576 , JCYJ20180507184647636 , JCYJ20190808155618806 , JCYJ20170413161913429 and JCYJ20170818094109846 ) and Sanming Project of Medicine in Shenzhen (No. SZSM201612027 ).
Publisher Copyright:
© 2020 Elsevier B.V.
PY - 2020/8
Y1 - 2020/8
N2 - The automated whole breast ultrasound (AWBUS) is a new breast imaging technique that can depict the whole breast anatomy. To facilitate the reading of AWBUS images and support the breast density estimation, an automatic breast anatomy segmentation method for AWBUS images is proposed in this study. The problem at hand is quite challenging as it needs to address issues of low image quality, ill-defined boundary, large anatomical variation, etc. To address these issues, a new deep learning encoder-decoder segmentation method based on a self-co-attention mechanism is developed. The self-attention mechanism is comprised of spatial and channel attention module (SC) and embedded in the ResNeXt (i.e., Res-SC) block in the encoder path. A non-local context block (NCB) is further incorporated to augment the learning of high-level contextual cues. The decoder path of the proposed method is equipped with the weighted up-sampling block (WUB) to attain class-specific better up-sampling effect. Meanwhile, the co-attention mechanism is also developed to improve the segmentation coherence among two consecutive slices. Extensive experiments are conducted with comparison to several the state-of-the-art deep learning segmentation methods. The experimental results corroborate the effectiveness of the proposed method on the difficult breast anatomy segmentation problem on AWBUS images.
AB - The automated whole breast ultrasound (AWBUS) is a new breast imaging technique that can depict the whole breast anatomy. To facilitate the reading of AWBUS images and support the breast density estimation, an automatic breast anatomy segmentation method for AWBUS images is proposed in this study. The problem at hand is quite challenging as it needs to address issues of low image quality, ill-defined boundary, large anatomical variation, etc. To address these issues, a new deep learning encoder-decoder segmentation method based on a self-co-attention mechanism is developed. The self-attention mechanism is comprised of spatial and channel attention module (SC) and embedded in the ResNeXt (i.e., Res-SC) block in the encoder path. A non-local context block (NCB) is further incorporated to augment the learning of high-level contextual cues. The decoder path of the proposed method is equipped with the weighted up-sampling block (WUB) to attain class-specific better up-sampling effect. Meanwhile, the co-attention mechanism is also developed to improve the segmentation coherence among two consecutive slices. Extensive experiments are conducted with comparison to several the state-of-the-art deep learning segmentation methods. The experimental results corroborate the effectiveness of the proposed method on the difficult breast anatomy segmentation problem on AWBUS images.
KW - Breast anatomy segmentation
KW - Encoder-decoder architecture
KW - Non-local cue
KW - Self-co-attention mechanism
UR - http://www.scopus.com/inward/record.url?scp=85086638686&partnerID=8YFLogxK
U2 - 10.1016/j.media.2020.101753
DO - 10.1016/j.media.2020.101753
M3 - Journal article
C2 - 32574986
AN - SCOPUS:85086638686
SN - 1361-8415
VL - 64
JO - Medical Image Analysis
JF - Medical Image Analysis
M1 - 101753
ER -