TY - GEN
T1 - Glaucoma progression prediction using retinal thickness via latent space linear regression
AU - Zheng, Yuhui
AU - Wang, Jing
AU - Xu, Linchuan
AU - Murata, Hiroshi
AU - Yamanishi, Kenji
AU - Kiwaki, Taichi
AU - Asaoka, Ryo
N1 - Funding Information:
This work was partially supported by JSPS KAKENHI Grant Number 19H01114, JSPS KAKENHI Grant Number JP18K18121, and by JST AIP, and by Grants 25861618 (HM) and 26462679 and 18KK0253 (RA) from the Ministry of Education, Culture, Sports, Science and Technology of Japan, and by Grants from Suzuken Memorial Foundation and Mitsui Life Social Welfare Foundation. We thank Mr Yuri Fujino and Mr Masato Matsuura, Department of Ophthalmology, The University of Tokyo, for providing us useful comments. We thank Dr Atsuya Miki, Osaka University Hospital, and Dr Takashi Kanamoto, Hiroshima Memorial Hospital, for providing us the data.
Publisher Copyright:
© 2019 Association for Computing Machinery.
PY - 2019/7/25
Y1 - 2019/7/25
N2 - Prediction of glaucomatous visual field loss has significant clinical benefits because it can help with early detection of glaucoma as well as decision-making for treatments. Glaucomatous visual loss is conventionally captured through visual field sensitivity (VF) measurement, which is costly and time-consuming. Thus, existing approaches mainly predict future VF utilizing limited VF data collected in the past. Recently, optical coherence tomography (OCT) has been adopted to measure retinal layers thickness (RT) for considerably more low-cost treatment assistance. There then arises an important question in the context of ophthalmology: are RT measurements beneficial for VF prediction? In this paper, we propose a novel method to demonstrate the benefits provided by RT measurements. The challenge is management of the two heterogeneities of VF data and RT data as RT data are collected according to different clinical schedules and lie in a different space to VF data. To tackle these heterogeneities, we propose latent progression patterns (LPPs), a novel type of representations for glaucoma progression. Along with LPPs, we propose a method to transform VF series to an LPP based on matrix factorization and a method to transform RT series to an LPP based on deep neural networks. Partial VF and RT information is integrated in LPPs to provide accurate prediction. The proposed framework is named deeply-regularized latent-space linear regression (DLLR). We empirically demonstrate that our proposed method outperforms the state-of-the-art technique by 12% for the best case in terms of the mean of the root mean square error on a real dataset.
AB - Prediction of glaucomatous visual field loss has significant clinical benefits because it can help with early detection of glaucoma as well as decision-making for treatments. Glaucomatous visual loss is conventionally captured through visual field sensitivity (VF) measurement, which is costly and time-consuming. Thus, existing approaches mainly predict future VF utilizing limited VF data collected in the past. Recently, optical coherence tomography (OCT) has been adopted to measure retinal layers thickness (RT) for considerably more low-cost treatment assistance. There then arises an important question in the context of ophthalmology: are RT measurements beneficial for VF prediction? In this paper, we propose a novel method to demonstrate the benefits provided by RT measurements. The challenge is management of the two heterogeneities of VF data and RT data as RT data are collected according to different clinical schedules and lie in a different space to VF data. To tackle these heterogeneities, we propose latent progression patterns (LPPs), a novel type of representations for glaucoma progression. Along with LPPs, we propose a method to transform VF series to an LPP based on matrix factorization and a method to transform RT series to an LPP based on deep neural networks. Partial VF and RT information is integrated in LPPs to provide accurate prediction. The proposed framework is named deeply-regularized latent-space linear regression (DLLR). We empirically demonstrate that our proposed method outperforms the state-of-the-art technique by 12% for the best case in terms of the mean of the root mean square error on a real dataset.
KW - Convolutional Neural Networks
KW - Coupled Matrix Factorization
KW - Glaucoma Progression Prediction
KW - Multi-view Learning
KW - Regression
KW - Regularization
UR - http://www.scopus.com/inward/record.url?scp=85071167339&partnerID=8YFLogxK
U2 - 10.1145/3292500.3330757
DO - 10.1145/3292500.3330757
M3 - Conference article published in proceeding or book
AN - SCOPUS:85071167339
T3 - Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining
SP - 2278
EP - 2286
BT - KDD 2019 - Proceedings of the 25th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining
PB - Association for Computing Machinery
T2 - 25th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, KDD 2019
Y2 - 4 August 2019 through 8 August 2019
ER -