TY - JOUR
T1 - Exonuclease III-Regulated Target Cyclic Amplification-Based Single Nucleotide Polymorphism Detection Using Ultrathin Ternary Chalcogenide Nanosheets
AU - Hu, Yanling
AU - Tan, Chaoliang
AU - Lin, Xin
AU - Lai, Zhuangchai
AU - Zhang, Xiao
AU - Lu, Qipeng
AU - Feng, Ning
AU - Yang, Dongliang
AU - Weng, Lixing
N1 - Funding Information:
This research was funded by the National Key Basic Research Program of China (2017YFA0205301), the Natural Science Foundation of the Jiangsu Higher Education Institutions (19KJB150030, 19KJB150031), and the open research fund of Jiangsu Key Laboratory for Biosensors (51204080).
Publisher Copyright:
© Copyright © 2019 Hu, Tan, Lin, Lai, Zhang, Lu, Feng, Yang and Weng.
PY - 2019/12/6
Y1 - 2019/12/6
N2 - Herein, we report that the ternary chalcogenide nanosheet exhibits different affinity toward oligonucleotides with different lengths and efficiently quenches the fluorescence of dye-labeled DNA probes. Based on these findings, as a proof-of-concept application, the ternary chalcogenide nanosheet is used as a target cyclic amplification biosensor, showing high specificity in discriminating single-base mismatch. This simple strategy is fast and sensitive for the single nucleotide polymorphism detection. Ultralow detection limit of unlabeled target (250 fM) and high discrimination ratio (5%) in the mixture of perfect match (mutant-type) and single-base mismatch (wild-type) target are achieved. This sensing method is extensively compatible for the single nucleotide polymorphism detection in clinical samples, making it a promising tool for the mutation-based clinical diagnostic and genomic research.
AB - Herein, we report that the ternary chalcogenide nanosheet exhibits different affinity toward oligonucleotides with different lengths and efficiently quenches the fluorescence of dye-labeled DNA probes. Based on these findings, as a proof-of-concept application, the ternary chalcogenide nanosheet is used as a target cyclic amplification biosensor, showing high specificity in discriminating single-base mismatch. This simple strategy is fast and sensitive for the single nucleotide polymorphism detection. Ultralow detection limit of unlabeled target (250 fM) and high discrimination ratio (5%) in the mixture of perfect match (mutant-type) and single-base mismatch (wild-type) target are achieved. This sensing method is extensively compatible for the single nucleotide polymorphism detection in clinical samples, making it a promising tool for the mutation-based clinical diagnostic and genomic research.
KW - fluorescent detection
KW - sensor
KW - single nucleotide polymorphisms
KW - ternary chalcogenide nanosheets
KW - two-dimensional nanomaterials
UR - http://www.scopus.com/inward/record.url?scp=85077242805&partnerID=8YFLogxK
U2 - 10.3389/fchem.2019.00844
DO - 10.3389/fchem.2019.00844
M3 - Journal article
AN - SCOPUS:85077242805
SN - 2296-2646
VL - 7
JO - Frontiers in Chemistry
JF - Frontiers in Chemistry
M1 - 844
ER -