Crystal Structure Prediction Using a Self-Attention Neural Network and Semantic Segmentation

Wuling Zhao, Minxia Zhou, Jialin Shao, Jingzheng Ren, Yusha Hu, Yulin Han (Corresponding Author), Yi Man (Corresponding Author)

Research output: Journal article publicationJournal articleAcademic researchpeer-review

Abstract

The development of new materials is a time-consuming and resource-intensive process. Deep learning has emerged as a promising approach to accelerate this process. However, accurately predicting crystal structures using deep learning remains a significant challenge due to the complex, high-dimensional nature of atomic interactions and the scarcity of comprehensive training data that captures the full diversity of possible crystal configurations. This work developed a neural network model based on a data set comprising thousands of crystallographic information files from existing crystal structure databases. The model incorporates a self-attention mechanism to enhance prediction accuracy by learning and extracting both local and global features of three-dimensional structures, treating the atoms in each crystal as point sets. This approach enables effective semantic segmentation and accurate unit cell prediction. Experimental results demonstrate that for unit cells containing up to 500 atoms, the model achieves a structure prediction accuracy of 89.78%.

Original languageEnglish
Pages (from-to)3928-3943
Number of pages16
JournalJournal of Chemical Information and Modeling
Volume65
Issue number8
DOIs
Publication statusPublished - 14 Apr 2025

ASJC Scopus subject areas

  • General Chemistry
  • General Chemical Engineering
  • Computer Science Applications
  • Library and Information Sciences

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