BSMART: A Matlab/C toolbox for analysis of multichannel neural time series

Jie Cui, Lei Xu, Steven L. Bressler, Mingzhou Ding, Hualou Liang (Corresponding Author)

Research output: Journal article publicationJournal articleAcademic researchpeer-review

164 Citations (Scopus)

Abstract

We have developed a Matlab/C toolbox, Brain-SMART (System for Multivariate AutoRegressive Time series, or BSMART), for spectral analysis of continuous neural time series data recorded simultaneously from multiple sensors. Available functions include time series data importing/exporting, preprocessing (normalization and trend removal), AutoRegressive (AR) modeling (multivariate/bivariate model estimation and validation), spectral quantity estimation (auto power, coherence and Granger causality spectra), network analysis (including coherence and causality networks) and visualization (including data, power, coherence and causality views). The tools for investigating causal network structures in respect of frequency bands are unique functions provided by this toolbox. All functionality has been integrated into a simple and user-friendly graphical user interface (GUI) environment designed for easy accessibility. Although we have tested the toolbox only on Windows and Linux operating systems, BSMART itself is system independent. This toolbox is freely available (http://www.brain-smart.org) under the GNU public license for open source development.

Original languageEnglish
Pages (from-to)1094-1104
Number of pages11
JournalNeural Networks
Volume21
Issue number8
DOIs
Publication statusPublished - 5 Jun 2008
Externally publishedYes

Keywords

  • Granger causality spectrum
  • Multivariate signal analysis
  • Network analysis
  • Neural time series
  • Open source toolbox

ASJC Scopus subject areas

  • Cognitive Neuroscience
  • Artificial Intelligence

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