TY - JOUR
T1 - 3D Multi-Attention Guided Multi-Task Learning Network for Automatic Gastric Tumor Segmentation and Lymph Node Classification
AU - Zhang, Yongtao
AU - Li, Haimei
AU - Du, Jie
AU - Qin, Jing
AU - Wang, Tianfu
AU - Chen, Yue
AU - Liu, Bing
AU - Gao, Wenwen
AU - Ma, Guolin
AU - Lei, Baiying
N1 - Funding Information:
Manuscript received January 19, 2021; accepted February 23, 2021. Date of publication March 1, 2021; date of current version June 1, 2021. This work was supported in part by the National Natural Science Foundation of China under Grant 81771922, Grant 62071309, Grant 61801305, Grant 62006160, Grant 81971585, and Grant 61871274; in part by the National Natural Science Foundation of Guangdong Province under Grant 2019A1515111205; in part by the Shenzhen Key Basic Research Project under Grant JCYJ20170818094109846, Grant JCYJ20180507184647636, Grant JCYJ20190808155618806, Grant GJHZ20190822095414576, and Grant JCYJ20190808145011259; and in part by the SZU Medical Young Scientists Program under Grant 71201-000001. (Corresponding authors: Guolin Ma; Baiying Lei.) Yongtao Zhang, Jie Du, and Tianfu Wang are with the Health Science Center, School of Biomedical Engineering, Shenzhen University, Shen-zhen 518060, China, also with the National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, Shenzhen University, Shenzhen 518060, China, and also with the Marshall Laboratory of Biomedical Engineering, Shenzhen University, Shenzhen 518060, China (e-mail: [email protected]; [email protected]; tfwang@ szu.edu.cn).
Publisher Copyright:
© 1982-2012 IEEE.
PY - 2021/6
Y1 - 2021/6
N2 - Automatic gastric tumor segmentation and lymph node (LN) classification not only can assist radiologists in reading images, but also provide image-guided clinical diagnosis and improve diagnosis accuracy. However, due to the inhomogeneous intensity distribution of gastric tumor and LN in CT scans, the ambiguous/missing boundaries, and highly variable shapes of gastric tumor, it is quite challenging to develop an automatic solution. To comprehensively address these challenges, we propose a novel 3D multi-attention guided multi-task learning network for simultaneous gastric tumor segmentation and LN classification, which makes full use of the complementary information extracted from different dimensions, scales, and tasks. Specifically, we tackle task correlation and heterogeneity with the convolutional neural network consisting of scale-aware attention-guided shared feature learning for refined and universal multi-scale features, and task-aware attention-guided feature learning for task-specific discriminative features. This shared feature learning is equipped with two types of scale-aware attention (visual attention and adaptive spatial attention) and two stage-wise deep supervision paths. The task-aware attention-guided feature learning comprises a segmentation-aware attention module and a classification-aware attention module. The proposed 3D multi-task learning network can balance all tasks by combining segmentation and classification loss functions with weight uncertainty. We evaluate our model on an in-house CT images dataset collected from three medical centers. Experimental results demonstrate that our method outperforms the state-of-the-art algorithms, and obtains promising performance for tumor segmentation and LN classification. Moreover, to explore the generalization for other segmentation tasks, we also extend the proposed network to liver tumor segmentation in CT images of the MICCAI 2017 Liver Tumor Segmentation Challenge. Our implementation is released at https://github.com/infinite-tao/MA-MTLN.
AB - Automatic gastric tumor segmentation and lymph node (LN) classification not only can assist radiologists in reading images, but also provide image-guided clinical diagnosis and improve diagnosis accuracy. However, due to the inhomogeneous intensity distribution of gastric tumor and LN in CT scans, the ambiguous/missing boundaries, and highly variable shapes of gastric tumor, it is quite challenging to develop an automatic solution. To comprehensively address these challenges, we propose a novel 3D multi-attention guided multi-task learning network for simultaneous gastric tumor segmentation and LN classification, which makes full use of the complementary information extracted from different dimensions, scales, and tasks. Specifically, we tackle task correlation and heterogeneity with the convolutional neural network consisting of scale-aware attention-guided shared feature learning for refined and universal multi-scale features, and task-aware attention-guided feature learning for task-specific discriminative features. This shared feature learning is equipped with two types of scale-aware attention (visual attention and adaptive spatial attention) and two stage-wise deep supervision paths. The task-aware attention-guided feature learning comprises a segmentation-aware attention module and a classification-aware attention module. The proposed 3D multi-task learning network can balance all tasks by combining segmentation and classification loss functions with weight uncertainty. We evaluate our model on an in-house CT images dataset collected from three medical centers. Experimental results demonstrate that our method outperforms the state-of-the-art algorithms, and obtains promising performance for tumor segmentation and LN classification. Moreover, to explore the generalization for other segmentation tasks, we also extend the proposed network to liver tumor segmentation in CT images of the MICCAI 2017 Liver Tumor Segmentation Challenge. Our implementation is released at https://github.com/infinite-tao/MA-MTLN.
KW - CT scans
KW - Gastric tumor segmentation
KW - lymph node classification
KW - multi-attention
KW - multi-task learning
UR - http://www.scopus.com/inward/record.url?scp=85102255872&partnerID=8YFLogxK
U2 - 10.1109/TMI.2021.3062902
DO - 10.1109/TMI.2021.3062902
M3 - Journal article
C2 - 33646948
AN - SCOPUS:85102255872
SN - 0278-0062
VL - 40
SP - 1618
EP - 1631
JO - IEEE Transactions on Medical Imaging
JF - IEEE Transactions on Medical Imaging
IS - 6
M1 - 9366506
ER -